These gingerbread cheesecake cookies are the ultimate holiday treat that combines soft, spiced gingerbread with a creamy cheesecake center. Each cookie features a rich cream cheese filling hidden inside perfectly spiced gingerbread dough, then rolled in sparkling cinnamon sugar for a beautiful finish. These stuffed gingerbread cookies deliver the cozy flavors of classic gingerbread with a luxurious cream cheese surprise that makes them absolutely irresistible for Christmas cookie platters, holiday gifts, or special winter gatherings.

The magic of these cheesecake-filled cookies lies in the incredible contrast of textures and flavors. The soft, chewy gingerbread exterior is loaded with warm spices—ginger, cinnamon, nutmeg, allspice, and cloves—while the tangy, sweet cream cheese center provides a cool, creamy surprise. The spiced sugar coating adds extra sparkle and a subtle crunch that makes each bite even more special. These cookies look impressive but are surprisingly straightforward to make with proper technique.
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Why These Gingerbread Cookies Are Special
These stuffed cookies elevate traditional gingerbread to something truly memorable. While classic gingerbread cookies are delicious on their own, adding the cream cheese filling transforms them into an elegant dessert worthy of your most special holiday celebrations. The hidden cheesecake center is a delightful surprise that makes these cookies conversation-starters at any gathering.
The flavor combination is absolutely perfect for the holiday season. The warming spices create that nostalgic gingerbread taste everyone loves, while the tangy cream cheese filling balances the sweetness and adds richness. Molasses gives the cookies deep flavor and beautiful color, while brown sugar contributes to their soft, chewy texture. The spiced sugar coating not only looks festive but adds another layer of cinnamon-ginger flavor.
These cookies are ideal for gifting because they’re beautiful, impressive, and stay fresh for days when refrigerated. Package them in decorative tins or boxes, and they become thoughtful homemade gifts that show you care. They’re also perfect for cookie exchanges since they stand out from typical holiday cookies and always get rave reviews.
Ingredients for Gingerbread Cheesecake Cookies
Cheesecake Filling:
- 6 oz cream cheese, cold
- 3 tablespoons granulated sugar
- 1/2 teaspoon vanilla extract
Spiced Sugar Coating:
- 6 tablespoons granulated sugar
- 1/2 teaspoon ground ginger
- 1/2 teaspoon ground cinnamon
- 1/8 teaspoon ground allspice
- 1/8 teaspoon ground nutmeg
- 1/8 teaspoon ground cloves
Gingerbread Cookie Dough:
- 2 1/2 cups all-purpose flour, spooned and leveled
- 2 1/2 teaspoons ground ginger
- 2 1/2 teaspoons ground cinnamon
- 1/2 teaspoon ground nutmeg
- 1/4 teaspoon ground allspice
- 1/4 teaspoon ground cloves
- 1/2 teaspoon salt
- 1/2 teaspoon baking soda
- 3/4 cup unsalted butter, softened
- 3/4 cup light brown sugar, packed
- 2 large egg yolks, room temperature
- 1 teaspoon vanilla extract
- 1/3 cup unsulphured molasses
Understanding Key Ingredients
Cold Cream Cheese: Starting with cold cream cheese is essential for the filling. Cold cream cheese is easier to portion into balls that hold their shape when frozen. If it’s too soft, the filling won’t freeze solid enough to wrap in dough. Use full-fat block cream cheese for the best flavor and texture—never use whipped or spreadable cream cheese from a tub.
Egg Yolks Only: Using just the yolks (not whole eggs) creates richer, chewier cookies with less spread. Egg yolks contain fat and emulsifiers that contribute to tender texture and deep flavor. Whole eggs would make the dough softer and cause more spreading during baking.
Unsulphured Molasses: This thick, dark sweetener provides the characteristic gingerbread flavor and beautiful dark color. “Unsulphured” means no sulfur dioxide was added during processing, resulting in cleaner, sweeter taste. Light or dark molasses both work—avoid blackstrap molasses, which is too bitter for cookies.
Fresh Spices: The combination of ginger, cinnamon, nutmeg, allspice, and cloves creates classic gingerbread flavor. Use fresh spices for the most vibrant taste—old spices lose potency over time. The generous amount of spices ensures bold flavor that stands up to the sweet cream cheese filling.
Light Brown Sugar: This adds moisture, chewiness, and subtle caramel notes. The molasses in brown sugar complements the molasses in the dough, creating deeper flavor. Always pack brown sugar firmly into your measuring cup for accurate measurement.
Room Temperature Ingredients: Softened butter and room temperature egg yolks mix more smoothly, creating better texture. Set butter out 1-2 hours before baking—it should be soft enough to leave an indent when pressed but not greasy or melted.
How to Make Gingerbread Cheesecake Cookies
Step 1: Make the Cheesecake Filling
In a medium bowl, beat the cold cream cheese, 3 tablespoons granulated sugar, and vanilla extract with a hand mixer on medium speed for about 2 minutes. The mixture should be completely smooth, fluffy, and free of lumps. Scrape down the sides of the bowl to ensure even mixing.
Using a small cookie scoop or measuring spoon, portion the cream cheese mixture into 18 small balls, each about 2 teaspoons in size. Place them on a parchment-lined baking sheet or plate. Transfer to the freezer and freeze for at least 1 hour, or until completely solid. These must be rock-hard before assembling cookies, or they’ll melt into the dough.
Step 2: Prepare the Spiced Sugar
In a small bowl, whisk together the sugar, ginger, cinnamon, allspice, nutmeg, and cloves until the spices are evenly distributed throughout the sugar. The mixture should look uniform in color with no clumps. Set aside for rolling the cookies later.
Step 3: Make the Gingerbread Cookie Dough
In a medium bowl, whisk together the flour, ginger, cinnamon, nutmeg, allspice, cloves, salt, and baking soda. Whisking thoroughly distributes the spices and leavening evenly throughout the flour. Set this bowl aside.
In a large mixing bowl or stand mixer, beat the softened butter and packed brown sugar together on medium-high speed for about 2 minutes. The mixture should become lighter in color and noticeably fluffy. This creaming process incorporates air that helps create tender cookies.
Add the egg yolks, vanilla extract, and molasses to the butter mixture. Beat on medium speed until fully combined and smooth—the mixture will look darker and glossy from the molasses.
Add the flour mixture to the wet ingredients and mix on low speed just until a thick, cohesive dough forms. Don’t overmix—stop as soon as no flour streaks remain visible. The dough will be thick, slightly sticky, and very aromatic from all the spices.
Step 4: Portion the Cookie Dough
Using a large cookie scoop or measuring spoon, portion the dough into 18 equal pieces, each about 2 tablespoons (approximately 40-45 grams if using a scale). Uniform sizing ensures the cookies bake evenly. Roll each portion into a smooth ball, then flatten slightly into a thick disc.
Step 5: Assemble the Stuffed Cookies
Remove the frozen cheesecake balls from the freezer. Working with one cookie at a time, place a frozen cheesecake ball in the center of a flattened dough disc. Bring the edges of the dough up and around the filling, pinching firmly to seal. Roll between your palms to create a smooth ball, making sure no cream cheese is visible and the seam is completely sealed.
This sealing step is crucial—any openings will allow the cream cheese to leak out during baking. The dough should completely encase the filling with no thin spots. If the dough cracks or seems difficult to work with, warm it slightly between your hands.
Step 6: Roll in Spiced Sugar
Roll each stuffed cookie ball generously in the spiced sugar mixture, coating all sides completely. The sugar coating should be thick and even, creating a sparkly exterior. Place the coated cookies on a parchment-lined baking sheet, spacing them about 2 inches apart. They will spread slightly during baking.
Step 7: Bake to Perfection
Preheat your oven to 350°F. For best results, bake only 6 cookies per sheet to allow proper heat circulation and prevent overcrowding. Bake for 11-12 minutes, until the edges are set and the tops look slightly cracked but the centers still appear soft. The cookies will look underdone—this is correct.
Don’t overbake or the cookies will be dry and the cream cheese filling may leak. The cookies continue cooking from residual heat after being removed from the oven.
Step 8: Cool Properly
Let the cookies cool on the baking sheet for 10 minutes without moving them. This cooling period is essential—the structure sets during this time, and moving them too early can cause them to fall apart or the filling to leak out.
After 10 minutes, carefully transfer the cookies to a wire cooling rack using a spatula. Let them cool completely before serving or storing. The cream cheese filling needs time to set back up after the heat of baking.

Pro Tips for Perfect Stuffed Cookies
Freeze Filling Completely: The cheesecake balls must be frozen solid before wrapping in dough. If they’re even slightly soft, they’ll melt into the dough during assembly and baking.
Seal Dough Thoroughly: Pinch seams very firmly and ensure no thin spots exist in the dough coating. Any weak spots will allow cream cheese to leak during baking.
Don’t Overbake: Remove cookies when edges are set but centers still look slightly underdone. They’ll firm up as they cool and remain soft and chewy inside.
Work Quickly: Assemble cookies efficiently so the frozen filling doesn’t soften too much. If the cheesecake balls start softening, pop them back in the freezer briefly.
Use Fresh Spices: Spices lose potency over time. Fresh spices create bold, vibrant gingerbread flavor that makes these cookies special.
Room Temperature for Serving: Let refrigerated cookies sit at room temperature for 15-20 minutes before serving so the cream cheese filling softens to that perfect creamy consistency.
Creative Variations and Additions
Lemon Gingerbread Cookies: Add 1 teaspoon lemon zest to the cream cheese filling for bright citrus notes that complement the warm spices beautifully.
Crystallized Ginger: Fold 1/3 cup finely chopped crystallized ginger into the cookie dough for extra ginger flavor and chewy texture.
White Chocolate Chips: Add 1/2 cup mini white chocolate chips to the dough for pockets of sweetness throughout.
Vanilla Glaze: Drizzle cooled cookies with simple vanilla glaze (1 cup powdered sugar mixed with 2-3 tablespoons milk) for extra sweetness and elegant presentation.
Orange Cream Cheese: Add 1 teaspoon orange zest to the filling for a citrus twist on the classic flavor combination.
Spiced Cream Cheese: Mix 1/4 teaspoon cinnamon into the cream cheese filling for even more spice throughout the cookie.
Chocolate Drizzle: Drizzle melted dark or white chocolate over cooled cookies for a decorative finish.
Storage and Make-Ahead Instructions
Refrigerator Storage: Store baked cookies in an airtight container in the refrigerator for up to 5 days. The cream cheese filling requires refrigeration for food safety. Bring to room temperature 15-20 minutes before serving for the best texture and flavor.
Freezer Storage: Freeze cooled cookies in a single layer on a baking sheet until solid, then transfer to freezer bags or airtight containers. Freeze for up to 2 months. Thaw in the refrigerator overnight, then bring to room temperature before serving.
Make-Ahead Dough: Prepare the cookie dough and cheesecake balls up to 1 day ahead. Keep them separately covered in the refrigerator, then assemble and bake when ready.
Freeze Unbaked Cookies: Assemble the stuffed cookies, freeze on a baking sheet until solid, then store in freezer bags for up to 2 months. Bake from frozen, adding 2-3 minutes to the baking time.
Frequently Asked Questions
Why use only egg yolks instead of whole eggs? Egg yolks create richer, chewier cookies with less spread. The fat in yolks contributes to tender texture, while egg whites would make the cookies spread more and have a cakier texture.
Can I use whipped cream cheese? No, whipped cream cheese contains too much air and won’t freeze solid enough to handle. Always use block cream cheese for best results.
What if my cream cheese filling leaks out? The dough wasn’t sealed properly, or the filling wasn’t frozen solid enough. Ensure tight sealing with no thin spots and completely frozen filling.
Do I need to chill the cookie dough? No chilling is required for the dough, which makes these cookies faster to prepare. However, freezing the filling is absolutely essential.
Can I make these cookies smaller? You can, but the 2-tablespoon size provides the ideal cookie-to-filling ratio. Smaller cookies may have too much filling proportionally or be difficult to seal properly.
Why do my cookies spread too much? Ensure your butter is softened but not melted, and that you’re measuring flour correctly by spooning and leveling. Also check that your oven temperature is accurate.
Can I skip the spiced sugar coating? Technically yes, but the coating adds beautiful appearance and extra flavor that really elevates these cookies. It’s worth including!
These gingerbread cheesecake cookies are guaranteed to become your new favorite holiday tradition. The combination of spiced gingerbread and creamy cheesecake center creates an unforgettable cookie that’s perfect for any Christmas celebration!

Gingerbread Cheesecake Cookies
Equipment
- Hand Mixer or Stand Mixer
- Mixing bowls
- Whisk
- Cookie Scoop
- Baking Sheets
- Parchment paper
- Wire Cooling Rack
Ingredients
- Cheesecake Filling
- 6 oz cream cheese, cold
- 3 tbsp granulated sugar
- 1/2 tsp vanilla extract
- Spiced Sugar Coating
- 6 tbsp granulated sugar
- 1/2 tsp ground ginger
- 1/2 tsp ground cinnamon
- 1/8 tsp ground allspice
- 1/8 tsp ground nutmeg
- 1/8 tsp ground cloves
- Gingerbread Cookie Dough
- 2 1/2 cups all-purpose flour, spooned and leveled
- 2 1/2 tsp ground ginger
- 2 1/2 tsp ground cinnamon
- 1/2 tsp ground nutmeg
- 1/4 tsp ground allspice
- 1/4 tsp ground cloves
- 1/2 tsp salt
- 1/2 tsp baking soda
- 3/4 cup unsalted butter, softened
- 3/4 cup light brown sugar, packed
- 2 large egg yolks, room temperature
- 1 tsp vanilla extract
- 1/3 cup unsulphured molasses
Instructions
- Beat cold cream cheese, sugar, and vanilla together until smooth. Scoop into 18 small balls (about 2 teaspoons each) and freeze for at least 1 hour until solid.
- Whisk together sugar, ginger, cinnamon, allspice, nutmeg, and cloves. Set aside for rolling.
- Whisk together flour, spices, salt, and baking soda. In another bowl, cream butter and brown sugar until fluffy. Add yolks, vanilla, and molasses. Mix in dry ingredients just until combined.
- Portion dough into 18 balls (about 2 tablespoons each) and flatten slightly into discs.
- Wrap each frozen cheesecake ball in a dough disc, sealing completely. Roll into smooth balls with no cracks.
- Roll each stuffed cookie in the spiced sugar mixture to coat all sides evenly.
- Preheat oven to 350°F (177°C). Place cookies 2 inches apart on parchment-lined sheets. Bake 11–12 minutes until edges are set and tops cracked but centers remain soft.
- Cool on baking sheet for 10 minutes before transferring to a rack. Let cool completely before storing or serving.